The detailed information of tRNA gene sequence


Sequence ID>WENV180095364
Genome IDMTBK01064843
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1621
End posion on genome 1546
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgataatgat
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGAGTCGGGAGTTCGAGT
CTCTCCTCCCGTGCCA
Downstream region at tRNA end position 
aaattcttga
Secondary structure (Cloverleaf model)
>WENV180095364	Trp	CCA
                   t      GCCA aaattcttga
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GAGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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