The detailed information of tRNA gene sequence


Sequence ID>WENV180095381
Genome IDMTBK01065448
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 405
End posion on genome 481
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
taaggtttgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
aatttgccgt
Secondary structure (Cloverleaf model)
>WENV180095381	fMet	CAT
                   t      ACCA aatttgccgt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    T       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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