The detailed information of tRNA gene sequence


Sequence ID>WENV180095391
Genome IDMTBK01066436
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3725
End posion on genome 3653
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ctcccatatc
tRNA gene sequence 
GGGCCAATAGCTCAGTAGGCAGAGCAACGCCCTTTTAAGGCGTGGGTCGATGGTTCGAAT
CCATCTTGGCTCAatt
Downstream region at tRNA end position 
tgtattttat
Secondary structure (Cloverleaf model)
>WENV180095391	Lys	TTT
                   c      Aatt tgtattttat
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     C T A C C     A
      T G A        A      | | | | |     G
    A       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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