The detailed information of tRNA gene sequence


Sequence ID>WENV180095399
Genome IDMTBK01066620
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 235006
End posion on genome 234932
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aatctcgcgc
tRNA gene sequence 
CGGGGTGTGGCGCAGACGGCTAGCGCGCTGCGTTTGGGACGCAGAGGTCGTCGGTTCAAG
TCCGACCACCCCGACtt
Downstream region at tRNA end position 
ttttgtttaa
Secondary structure (Cloverleaf model)
>WENV180095399	Pro	TGG
                   c      ACtt ttttgtttaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C A G C C     A
      A G A        G      | | | | |     A
    C       C G C G       G T C G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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