The detailed information of tRNA gene sequence


Sequence ID>WENV180095400
Genome IDMTBK01066620
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 60734
End posion on genome 60662
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aggagttcat
tRNA gene sequence 
TGCGGGGTAGAGCAGAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCAGTGGTTCGAATC
CGCTCCCCGCTACtg
Downstream region at tRNA end position 
acaaaaccag
Secondary structure (Cloverleaf model)
>WENV180095400	fMet	CAT
                   t      ACtg acaaaaccag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C G C C     A
        G A        A      | | + | |     G
      A     C G A G       A G T G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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