The detailed information of tRNA gene sequence


Sequence ID>WENV180095402
Genome IDMTBK01066886
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 363
End posion on genome 455
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaaagctttt
tRNA gene sequence 
GGAGGGTTGTCCGAGCTGGCTGAAGGAGCGCGACTGGAAATCGCGTGTACCCTTAACCGG
GTATCGAGAGTTCGAATCTCTTGCCCTCCGCCA
Downstream region at tRNA end position 
aatcttccgt
Secondary structure (Cloverleaf model)
>WENV180095402	Ser	GGA
                   t      GCCA aatcttccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     T T C T C     A
    T C G A        G      + | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTACCCTTAACCGGGTATC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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