The detailed information of tRNA gene sequence


Sequence ID>WENV180095409
Genome IDMTBK01067082
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 125
End posion on genome 215
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatttcatat
tRNA gene sequence 
GGAGGAATACCCAAGTCTGGTTGAAGGGGCCGGTCTTGAAAACCGGAAGGGTGTAAAAGC
CGCGTGGGTTCAAATCCTACTTCCTCCGCCA
Downstream region at tRNA end position 
ttttaaattt
Secondary structure (Cloverleaf model)
>WENV180095409	Ser	TGA
                   t      GCCA ttttaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C A T C C     A
    C T G A        A      | | + | |     A
  T         A C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T T G A        G     AAGGGTGTAAAAGCCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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