The detailed information of tRNA gene sequence


Sequence ID>WENV180095410
Genome IDMTBK01067082
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 231
End posion on genome 307
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattttatac
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCATCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCCTCCCCCGCAACCA
Downstream region at tRNA end position 
attatagatg
Secondary structure (Cloverleaf model)
>WENV180095410	fMet	CAT
                   c      ACCA attatagatg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | |   | |     A
    C       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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