The detailed information of tRNA gene sequence


Sequence ID>WENV180095411
Genome IDMTBK01067082
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 317
End posion on genome 392
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aattatagat
tRNA gene sequence 
GGTCTCGTGGTGTAGTGGTCAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCAAGT
CCCGTCGGGACCGCCA
Downstream region at tRNA end position 
tctgttggct
Secondary structure (Cloverleaf model)
>WENV180095411	Asp	GTC
                   t      GCCA tctgttggct
                     G - C
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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