The detailed information of tRNA gene sequence


Sequence ID>WENV180095416
Genome IDMTBK01067174
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1467
End posion on genome 1394
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgatgcatca
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTCACACGGCGAAGATCGGGCGTTCGAA
TCGCCCCGAGCCCAttt
Downstream region at tRNA end position 
ctcttcgtcc
Secondary structure (Cloverleaf model)
>WENV180095416	Val	CAC
                   a      Attt ctcttcgtcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C C C G C     A
      C G A        G      | | | | |     G
    T       T C T G       G G G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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