The detailed information of tRNA gene sequence


Sequence ID>WENV180095428
Genome IDMTBK01067616
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1509
End posion on genome 1438
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cccagccatc
tRNA gene sequence 
GGTTCCTTCGTCTAATGGTTAGGACGGGAGATTCTCAGTCTCTAAATAGGGGTTCGATTC
CCCTAGGAACTAtca
Downstream region at tRNA end position 
catgaggacg
Secondary structure (Cloverleaf model)
>WENV180095428	Glu	CTC
                   c      Atca catgaggacg
                     G + T
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T A A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAT
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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