The detailed information of tRNA gene sequence


Sequence ID>WENV180095438
Genome IDMTBK01068188
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 799
End posion on genome 873
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acgtgaacgt
tRNA gene sequence 
GGCGTGTTCGTCTATCGGTTAGGACACAGCCCTCTCAAGGCTGAGAGATGGGTTCGATTC
CCATACACGCTACCA
Downstream region at tRNA end position 
tgctctcgtg
Secondary structure (Cloverleaf model)
>WENV180095438	Glu	CTC
                   t      ACCA tgctctcgtg
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     T - A          T T
                    T     T A C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A T G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AGAG
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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