The detailed information of tRNA gene sequence


Sequence ID>WENV180095456
Genome IDMTBK01069162
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1465
End posion on genome 1548
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aggtacgtac
tRNA gene sequence 
GCCGGTGTGGCGGAATGGTAGACGCGGGGCACTCAAAATGCTTTGCTCGCAAGGGCGTGC
GGGTTCGAGTCCCGCCACCGGTACgt
Downstream region at tRNA end position 
gaaaaaggcc
Secondary structure (Cloverleaf model)
>WENV180095456	Leu	CAA
                   c      ACgt gaaaaaggcc
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G C G G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGCTCGCAAGGGCGT
                    G + T
                    G + T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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