The detailed information of tRNA gene sequence


Sequence ID>WENV180095460
Genome IDMTBK01069430
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 364
End posion on genome 290
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
atgtagtaat
tRNA gene sequence 
GGCCCATTGGTCAAGAGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATC
CCCTATGGGTCACCA
Downstream region at tRNA end position 
ttagtgtatt
Secondary structure (Cloverleaf model)
>WENV180095460	Glu	TTC
                   t      ACCA ttagtgtatt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     T C C C C     A
      A G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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