The detailed information of tRNA gene sequence


Sequence ID>WENV180095461
Genome IDMTBK01069453
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 260
End posion on genome 336
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcacgcatgg
tRNA gene sequence 
GGCGACGTAGCCAAGGGGTCAAAGGCGGAGGTCTGCAAAATCTCTATTCGAGGGTTCAAA
TCCCTCCGTCGCCTCCA
Downstream region at tRNA end position 
agaaatgggc
Secondary structure (Cloverleaf model)
>WENV180095461	Cys	GCA
                   g      TCCA agaaatgggc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      G G A        A      | | | | |     A
    G       A C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C A A        G     TATTC
                    G - C
                    A - T
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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