The detailed information of tRNA gene sequence


Sequence ID>WENV180095462
Genome IDMTBK01069453
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 343
End posion on genome 418
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccaagaaat
tRNA gene sequence 
GGGCTCGTAGCTCAGTCGGTAGAGCATCCGGCTCATAACCGGGCGGTCGGGGGTTCGATC
CCTCCCGAGCCCACCA
Downstream region at tRNA end position 
aaagtcttaa
Secondary structure (Cloverleaf model)
>WENV180095462	Met	CAT
                   t      ACCA aaagtcttaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          C T
                    T     C C T C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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