The detailed information of tRNA gene sequence


Sequence ID>WENV180095470
Genome IDMTBK01069466
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 226
End posion on genome 139
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcatcataaT
tRNA gene sequence 
GGAGAGGTATCGAAGTGGTCATAACGAGGCGGTCTTGAAAACCGTTTGGGTGAAAGCCCG
CGTGGGTTCGAATCCCACCCTCTCCGTaa
Downstream region at tRNA end position 
aaagatgcac
Secondary structure (Cloverleaf model)
>WENV180095470	Ser	TGA
                   T      GTaa aaagatgcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGGGTGAAAGCCCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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