The detailed information of tRNA gene sequence


Sequence ID>WENV180095471
Genome IDMTBK01069483
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4106
End posion on genome 4030
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cgggcggcgg
tRNA gene sequence 
CGGGCTGTGGCGCAGCTTGGTAGCGCACTTGACTGGGGGTCAAGTGGTCGCAGGTTCAAA
TCCTGTCAGCCCGACCA
Downstream region at tRNA end position 
aaaaaccggc
Secondary structure (Cloverleaf model)
>WENV180095471	Pro	GGG
                   g      ACCA aaaaaccggc
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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