The detailed information of tRNA gene sequence


Sequence ID>WENV180095476
Genome IDMTBK01069985
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 179
End posion on genome 94
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggcaagccac
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTGCGAAAGCACCGT
GGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
ttatcaagct
Secondary structure (Cloverleaf model)
>WENV180095476	Ser	TGA
                   c      GCCA ttatcaagct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTGCGAAAGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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