The detailed information of tRNA gene sequence


Sequence ID>WENV180095481
Genome IDMTBK01070704
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 350
End posion on genome 426
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
agtggtttca
tRNA gene sequence 
GGGGCGTTAGCTCAGCAGGTTAGAGCAGAGGACTCATAATCCTTGGGTCGCGGGTTCGAG
CCCCGCACGCCCTACCA
Downstream region at tRNA end position 
atgaaaccag
Secondary structure (Cloverleaf model)
>WENV180095481	Ile2	CAT
                   a      ACCA atgaaaccag
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          C G
                    T     C G C C C     A
      C G A        A      | | | | |     G
    A       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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