The detailed information of tRNA gene sequence


Sequence ID>WENV180095483
Genome IDMTBK01070855
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1576
End posion on genome 1500
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gccagatcct
tRNA gene sequence 
GGTCCCGTGGTGAAGTTGGAGTTCACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCGAG
TCCCGTCGGGACCGCCA
Downstream region at tRNA end position 
gtcggcgggt
Secondary structure (Cloverleaf model)
>WENV180095483	Asp	GTC
                   t      GCCA gtcggcgggt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     G
    T       A G T G       G C G G G     C
    G       | | | |                 T T
    G       T C A C
      A G T        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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