The detailed information of tRNA gene sequence


Sequence ID>WENV180095484
Genome IDMTBK01071063
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 245
End posion on genome 170
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tattaactgt
tRNA gene sequence 
GGAGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGTAGGTTCGAGC
CCTACATTCTCCACCA
Downstream region at tRNA end position 
ttgtttgccg
Secondary structure (Cloverleaf model)
>WENV180095484	Val	TAC
                   t      ACCA ttgtttgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     A - T
                     T - A          C G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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