The detailed information of tRNA gene sequence


Sequence ID>WENV180095491
Genome IDMTBK01071241
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 686
End posion on genome 596
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnaaatatt
tRNA gene sequence 
GGAGGGTTGGCTGAGCGGTCCAAAGCAACGGTTTGCTAAACCGTGGGGATCTAAAAGTCC
CCCGTGGGTTCGAATCCCACACCCTCCGCCA
Downstream region at tRNA end position 
gttggaaaat
Secondary structure (Cloverleaf model)
>WENV180095491	Ser	GCT
                   t      GCCA gttggaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C C A        A     GGGGATCTAAAAGTCCCCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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