The detailed information of tRNA gene sequence


Sequence ID>WENV180095496
Genome IDMTBK01071700
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1245
End posion on genome 1172
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttacttcga
tRNA gene sequence 
GGGCCTGTGGTCTAGCTGGTTATGACATCGCCTTCACACGGCGGGGATCACGCGTTCGAA
TCGCGTCGGGCCCAttc
Downstream region at tRNA end position 
ggattcggat
Secondary structure (Cloverleaf model)
>WENV180095496	Val	CAC
                   a      Attc ggattcggat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T G C G C     A
      C G A        G      | | | | |     G
    T       T C T G       A C G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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