The detailed information of tRNA gene sequence


Sequence ID>WENV180095497
Genome IDMTBK01071751
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 375
End posion on genome 282
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttccaagcgc
tRNA gene sequence 
GGAGATGTGTCCGAGTTGGCTGAAGGAGCACGATTGGAAATCGTGTATATGTGCAAAACG
CGTATCCTGGGTTCGAATCCCAGCATCTCCGCCA
Downstream region at tRNA end position 
ctcaattttt
Secondary structure (Cloverleaf model)
>WENV180095497	Ser	GGA
                   c      GCCA ctcaattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     G A C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       C T G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TATATGTGCAAAACGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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