The detailed information of tRNA gene sequence


Sequence ID>WENV180095499
Genome IDMTBK01071828
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5934
End posion on genome 6020
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgctgacatT
tRNA gene sequence 
GGAGCGGTGTCCGAGGGGTTTAAGGAGACGGTCTTGAAAACCGCTGTACCGCAAGGTACC
GGGGGTTCGAATCCCCCCTGCTCCGAta
Downstream region at tRNA end position 
aaagccatct
Secondary structure (Cloverleaf model)
>WENV180095499	Ser	TGA
                   T      GAta aaagccatct
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      G G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGTACCGCAAGGTACC
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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