The detailed information of tRNA gene sequence


Sequence ID>WENV180095500
Genome IDMTBK01071828
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6040
End posion on genome 6127
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctggtctaa
tRNA gene sequence 
GGAGAGGTGCGAGAGAGGCCGAATCGGGCTCCCTGCTAAGGAGTTGTACCTCTAAAGGGT
ACCGAGGGTTCGAATCCCTCCCTCTCCGatt
Downstream region at tRNA end position 
tttcgtgagg
Secondary structure (Cloverleaf model)
>WENV180095500	Ser	GCT
                   a      Gatt tttcgtgagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGTACCTCTAAAGGGTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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