The detailed information of tRNA gene sequence


Sequence ID>WENV180095502
Genome IDMTBK01071828
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6219
End posion on genome 6305
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cattcttatt
tRNA gene sequence 
GGAGAGATGCGAGAGCGGTTGAATCGGGCGGTCTCGAAAACCGTTGAACCCTCTGGGTTC
CGGGGGTTCGAATCCCCCTCTCTCCGCta
Downstream region at tRNA end position 
taataaaccg
Secondary structure (Cloverleaf model)
>WENV180095502	Ser	CGA
                   t      GCta taataaaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGAACCCTCTGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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