The detailed information of tRNA gene sequence


Sequence ID>WENV180095507
Genome IDMTBK01071961
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2761
End posion on genome 2667
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tattattgat
tRNA gene sequence 
GGGGATAGATAGGTGCTGGTGTGCCTCCTGGTCTTCAAAATCAGCTGCGGGGCGGAGACG
TCCTGGGTGGGTTCAATTCCCACATATTCCCGCCA
Downstream region at tRNA end position 
ttttaaggag
Secondary structure (Cloverleaf model)
>WENV180095507	SeC	TCA
                   t      GCCA ttttaaggag
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     A
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G T          C     CTGCGGGGCGGAGACGTCCTGG
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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