The detailed information of tRNA gene sequence


Sequence ID>WENV180095511
Genome IDMTBK01072550
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 413
End posion on genome 488
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cctccgaaac
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGGAGAGCGCCTGCTTTGCAAGCAGGAGGTCAGCGGTTCGAGA
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
ctgttctttg
Secondary structure (Cloverleaf model)
>WENV180095511	Ala	TGC
                   c      ACCA ctgttctttg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          A G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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