The detailed information of tRNA gene sequence


Sequence ID>WENV180095513
Genome IDMTBK01072634
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1417
End posion on genome 1343
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ataattttta
tRNA gene sequence 
GGGTTGTTAGCTCAGCTGGTTTAGAGCGCATGCTTCACACGCATGAGGTCAGCAGTTCGA
ATCTGCTACGACCCAtta
Downstream region at tRNA end position 
ttttttgata
Secondary structure (Cloverleaf model)
>WENV180095513	Val	CAC
                   a      Atta ttttttgata
                     G - C
                     G - C
                     G - C
                     T - A
                     T + G
                     G - C
                     T - A          T A
                    T     T C G T C     A
    T C G A        A      | | | | |     G
  G         C T C G       A G C A G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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