The detailed information of tRNA gene sequence


Sequence ID>WENV180095514
Genome IDMTBK01072659
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1329
End posion on genome 1254
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cttttggcag
tRNA gene sequence 
GGGCGTGTAGCTCAGTTGGGAGAGTGCCTGGTTCGCATCCAGGAGGTCAGGGGTTCAAGT
CCCCTCACGTCCACCA
Downstream region at tRNA end position 
gaaaaatgag
Secondary structure (Cloverleaf model)
>WENV180095514	Ala	CGC
                   g      ACCA gaaaaatgag
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T - A
                     G - C          T G
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | +                 T T
    G       G A G T
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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