The detailed information of tRNA gene sequence


Sequence ID>WENV180095516
Genome IDMTBK01072667
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 475
End posion on genome 399
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgtgagagt
tRNA gene sequence 
GGCGGCGTAGCTCAGTCGGTTAGAGCATCGGAATCATAATCCGCAGGTCCGGGGTTCAAG
TCCCTGCGCCGCTACCA
Downstream region at tRNA end position 
cgtttatttt
Secondary structure (Cloverleaf model)
>WENV180095516	Met	CAT
                   t      ACCA cgtttatttt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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