The detailed information of tRNA gene sequence


Sequence ID>WENV180095521
Genome IDMTBK01072919
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9411
End posion on genome 9335
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cttttgtatt
tRNA gene sequence 
GCCGAAGTAGCTCAGTTGGTCAGAGCAACTGTTTTGTAAACAGTAGGTCGAGAGTTCGAA
TCTCTCCTTCGGCTCCA
Downstream region at tRNA end position 
tgcagaggtg
Secondary structure (Cloverleaf model)
>WENV180095521	Thr	TGT
                   t      TCCA tgcagaggtg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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