The detailed information of tRNA gene sequence


Sequence ID>WENV180095522
Genome IDMTBK01072919
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9334
End posion on genome 9250
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tcggctccaT
tRNA gene sequence 
GCAGAGGTGGCGGAGCGGTCAAACGCATCGGACTGTAAATCCGACTCCTTCGGGATACAC
TGGTTCAAATCCAGTCCTCTGCATtt
Downstream region at tRNA end position 
ttatcactaa
Secondary structure (Cloverleaf model)
>WENV180095522	Tyr	GTA
                   T      ATtt ttatcactaa
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G A C C     A
      C G A        G      | | | | |     A
    G       G G C G       A C T G G     C
    G         | | |                 T T
    T       A C G C
      C A A        A     CTCCTTCGGGATAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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