The detailed information of tRNA gene sequence


Sequence ID>WENV180095524
Genome IDMTBK01072919
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6435
End posion on genome 6360
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taatagttaa
tRNA gene sequence 
GGGCCCATAGTTTTAACTGGTAAAACAGCGGTCTCCAAAACCGTAGTTCTCCGTTCGAAC
CGGAGTGGGCCTGCCA
Downstream region at tRNA end position 
aaagaataat
Secondary structure (Cloverleaf model)
>WENV180095524	Trp	CCA
                   a      GCCA aaagaataat
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     G A G G C     A
      A A T        A      | | | | |     G
    C       T T T G       C T C C G     C
    T       | | | |                 T T
    G       A A A C
      G T A        A     AGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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