The detailed information of tRNA gene sequence


Sequence ID>WENV180095534
Genome IDMTBK01073123
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 11
End posion on genome 98
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaatatttc
tRNA gene sequence 
GGTGAGGTGGGTGAGCGGCTTAAACCAATAGTTTGCTAAACTATCGTACTGGAAACGGTA
CCGAGGGTTCGAATCCCTCCCTCACCGCta
Downstream region at tRNA end position 
aaagaaaacg
Secondary structure (Cloverleaf model)
>WENV180095534	Ser	GCT
                   c      GCta aaagaaaacg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACTGGAAACGGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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