The detailed information of tRNA gene sequence


Sequence ID>WENV180095553
Genome IDMTBK01073760
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 197
End posion on genome 108
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caacaatgtc
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAACGGTTTGCTAAACCGTCGTACGGGCAACTGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aacgaaggtc
Secondary structure (Cloverleaf model)
>WENV180095553	Ser	GCT
                   c      GCCA aacgaaggtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGCAACTGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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