The detailed information of tRNA gene sequence


Sequence ID>WENV180095555
Genome IDMTBK01073995
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4288
End posion on genome 4215
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cacgcaatat
tRNA gene sequence 
TGCGGGGTAGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAAGTTCGAGT
CTTGCCCCCGCTACta
Downstream region at tRNA end position 
gaaacccttt
Secondary structure (Cloverleaf model)
>WENV180095555	fMet	CAT
                   t      ACta gaaacccttt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T T C     A
      T G A        A      | | | | |     G
    T       C G A G       G C A A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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