The detailed information of tRNA gene sequence


Sequence ID>WENV180095559
Genome IDMTBK01074261
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5530
End posion on genome 5458
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
taaaatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAATC
CTCCCTCCGCTACaa
Downstream region at tRNA end position 
ggaaaaagcc
Secondary structure (Cloverleaf model)
>WENV180095559	fMet	CAT
                   t      ACaa ggaaaaagcc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C C T C C     A
        G A        G      | | | | |     G
      T     C G A G       G G A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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