The detailed information of tRNA gene sequence


Sequence ID>WENV180095560
Genome IDMTBK01074287
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 373
End posion on genome 296
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttcttctatt
tRNA gene sequence 
CGGGATGTAGCGCAGCCCGGTTAGCGCGCTTCGTTCGGGACGAAGAGGCCGGAGGTTCAA
ATCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gttatataac
Secondary structure (Cloverleaf model)
>WENV180095560	Pro	CGG
                   t      ACCA gttatataac
                     C - G
                     G - C
                     G - C
                     G - C
                     A   C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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