The detailed information of tRNA gene sequence


Sequence ID>WENV180095578
Genome IDMTBK01076386
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1004
End posion on genome 930
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnncacttt
tRNA gene sequence 
CGGGGTGTAGCGCAGTCCGGTAGCGCACCTGCTTTGGGAGCAGGGGGTCCCAGGTTCGAA
TCCTGGTACCCCGACta
Downstream region at tRNA end position 
aaataaaact
Secondary structure (Cloverleaf model)
>WENV180095578	Pro	TGG
                   t      ACta aaataaaact
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    C       C G C G       C C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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