The detailed information of tRNA gene sequence


Sequence ID>WENV180095580
Genome IDMTBK01076701
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 465
End posion on genome 540
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gacagaccac
tRNA gene sequence 
GGGGGCATAGCTCAGTTGGTAGAGCGCCAGCTTTGCAAGCTGGAAGTCACGGGTTCGAAT
CCCGTTGCCTCCACCA
Downstream region at tRNA end position 
acgcaaccgg
Secondary structure (Cloverleaf model)
>WENV180095580	Ala	TGC
                   c      ACCA acgcaaccgg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AAGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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