The detailed information of tRNA gene sequence


Sequence ID>WENV180095587
Genome IDMTBK01077039
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 50267
End posion on genome 50338
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgggcactg
tRNA gene sequence 
GGCGAGATAGCTCAACGGTGGAGCAGTGGACTCATAAGCCATTGGTTCTGGGTTCAAATC
CCAGTCTCGCCAttt
Downstream region at tRNA end position 
agaaaataac
Secondary structure (Cloverleaf model)
>WENV180095587	Met	CAT
                   g      Attt agaaaataac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
        A A        A      | | | | |     A
      C     C T C G       C T G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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