The detailed information of tRNA gene sequence


Sequence ID>WENV180095615
Genome IDMTBK01078091
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4761
End posion on genome 4675
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttcgcaccc
tRNA gene sequence 
GGAGGGGTGTCCGAGAGGTTTAAGGAGCCGGTCTTGAAAACCGGTGACCCGAAAGGGCCG
TGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
cgaatcaagg
Secondary structure (Cloverleaf model)
>WENV180095615	Ser	TGA
                   c      GCCA cgaatcaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACCCGAAAGGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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