The detailed information of tRNA gene sequence


Sequence ID>WENV180095618
Genome IDMTBK01078091
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2325
End posion on genome 2232
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atggtggcac
tRNA gene sequence 
GGAGAGATGGCCGAGTTGGACGAAGGCGCTCGACTCGAAATCGAGTAAGTGGTGATGAGC
CGCTTCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gattataaaa
Secondary structure (Cloverleaf model)
>WENV180095618	Ser	CGA
                   c      GCCA gattataaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       C A G G G     C
  G           | | |                 T T
  A         A G G C
    C G A          G     TAAGTGGTGATGAGCCGCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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