The detailed information of tRNA gene sequence


Sequence ID>WENV180095619
Genome IDMTBK01078093
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 260
End posion on genome 188
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gcaaattaat
tRNA gene sequence 
GGTCCCATAGTTCAATGGATAGAATACTGGATTCCGGTTCCAGCGATATGGGTTCGAATC
CCGTTGGGACCGCta
Downstream region at tRNA end position 
tttcagtgat
Secondary structure (Cloverleaf model)
>WENV180095619	Arg	CCG
                   t      GCta tttcagtgat
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      T A A        A      | + | | |     G
    G       C T T G       A T G G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     CGAT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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