The detailed information of tRNA gene sequence


Sequence ID>WENV180095621
Genome IDMTBK01078123
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 208
End posion on genome 125
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tacatattcc
tRNA gene sequence 
GGGGCGGTGGCGGAATAGGCAGACGCAACGGACTTAAAATCCGTCGGTGGTGACACTATG
TGGGTTCGACCCCCACCCGCCCTAtat
Downstream region at tRNA end position 
gagcagctca
Secondary structure (Cloverleaf model)
>WENV180095621	Leu	TAA
                   c      Atat gagcagctca
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C C
                    T     C A C C C     A
      T A A        G      | | | | |     G
    A       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGTGGTGACACTAT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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