The detailed information of tRNA gene sequence


Sequence ID>WENV180095622
Genome IDMTBK01078254
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 991
End posion on genome 1078
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttttgtttg
tRNA gene sequence 
GGAGGGGTGTCAGAGCGGACGAATGAGGTAGTCTTGAAAACTACTGTGGGGCAACTCACC
GTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
agttttacat
Secondary structure (Cloverleaf model)
>WENV180095622	Ser	TGA
                   g      GCCA agttttacat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C T       G T G G G     C
    G         | | |                 T T
    A       A T G A
      C G A        G     TGTGGGGCAACTCACC
                    G - C
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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