The detailed information of tRNA gene sequence


Sequence ID>WENV180095624
Genome IDMTBK01078363
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2201
End posion on genome 2294
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcgccttcc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGGGCTACAACC
TGTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ccccctcccc
Secondary structure (Cloverleaf model)
>WENV180095624	Ser	GCT
                   c      GCCA ccccctcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGCTACAACCTGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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